annotate Makefile.am @ 2679:c0a572a11ab9 default tip develop

Silence some warnings
author Jordi Gutiérrez Hermoso <jordigh@octave.org>
date Mon, 14 May 2012 17:37:56 -0400
parents aa328918dc06
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
1 # Makefile.am for MINC2
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
2 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
3 AUTOMAKE_OPTIONS = check-news subdir-objects
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
4 ACLOCAL_AMFLAGS = -I m4
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
5
1806
ef2d8ae4468b Define AM_CFLAGS explicitly (to nothing)
bert <bert>
parents: 1769
diff changeset
6 AM_CFLAGS =
2381
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
7 AM_YFLAGS = -d --debug
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
8
2189
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
9 SUBDIRS = . volume_io testdir doc
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
10 if MINC2
2470
9f773b840171 Remove unnecessary libsrc2/Makefile.am
stever <stever>
parents: 2454
diff changeset
11 SUBDIRS += libsrc2/test
2189
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
12 endif
1508
ef270f384480 Add testdir tests.
stever <stever>
parents: 1505
diff changeset
13
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
14 # how to build man pages from POD
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
15 progs/minccomplete/minccomplete.man1: progs/minccomplete/minccomplete
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
16 $(POD2MAN) --section=1 $< > $@
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
17 progs/minchistory/minchistory.man1: progs/minchistory/minchistory
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
18 $(POD2MAN) --section=1 $< > $@
2629
9d489fbf4e7b * added mincpik to files that are autogenerated with version numbers
Andrew L Janke <a.janke@gmail.com>
parents: 2564
diff changeset
19 progs/mincpik/mincpik.man1: progs/mincpik/mincpik
9d489fbf4e7b * added mincpik to files that are autogenerated with version numbers
Andrew L Janke <a.janke@gmail.com>
parents: 2564
diff changeset
20 $(POD2MAN) --section=1 $< > $@
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
21
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
22 # Add these to the include searches.
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
23 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
24 INCLUDES = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
25 -I$(top_srcdir)/libsrc \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
26 -I$(top_builddir)/volume_io/Include \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
27 -I$(top_srcdir)/volume_io/Include \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
28 -I$(top_srcdir)/progs/Proglib \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
29 -I$(top_srcdir)/conversion/Acr_nema
2381
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
30
2373
037e089f685f * small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents: 2367
diff changeset
31 if MINC2
037e089f685f * small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents: 2367
diff changeset
32 INCLUDES += -I$(top_srcdir)/libsrc2
037e089f685f * small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents: 2367
diff changeset
33 endif
037e089f685f * small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents: 2367
diff changeset
34
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
35 # Headers which must be installed.
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
36 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
37 include_HEADERS = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
38 libsrc/minc.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
39 libsrc/ParseArgv.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
40 libsrc/voxel_loop.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
41 libsrc/nd_loop.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
42 libsrc/time_stamp.h \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
43 libsrc/minc_compat.h \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
44 volume_io/Include/volume_io.h \
1894
36beb39a0af4 Add minc_simple, Windows makefiles
bert <bert>
parents: 1868
diff changeset
45 libsrc2/minc2.h \
36beb39a0af4 Add minc_simple, Windows makefiles
bert <bert>
parents: 1868
diff changeset
46 libsrc/minc_simple.h
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
47
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
48 include_volume_iodir = $(includedir)/volume_io
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
49
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
50 include_volume_io_HEADERS = \
2055
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
51 volume_io/Include/volume_io/alloc.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
52 volume_io/Include/volume_io/arrays.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
53 volume_io/Include/volume_io/basic.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
54 volume_io/Include/volume_io/def_math.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
55 volume_io/Include/volume_io/files.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
56 volume_io/Include/volume_io/geom_structs.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
57 volume_io/Include/volume_io/geometry.h \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
58 volume_io/Include/internal_volume_io.h \
2055
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
59 volume_io/Include/volume_io/multidim.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
60 volume_io/Include/volume_io/progress.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
61 volume_io/Include/volume_io/string_funcs.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
62 volume_io/Include/volume_io/system_dependent.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
63 volume_io/Include/volume_io/transforms.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
64 volume_io/Include/volume_io/vol_io_prototypes.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
65 volume_io/Include/volume_io/volume.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
66 volume_io/Include/volume_io/volume_cache.h
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
67
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
68 # Header files which must be included in the distribution but which are
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
69 # not part of the installation.
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
70 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
71 noinst_HEADERS = \
2545
4b26fb8b776c * added a patch from Steve Robbins removing references to PATH_MAX
Andrew L Janke <a.janke@gmail.com>
parents: 2518
diff changeset
72 libsrc/read_file_names.h \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
73 libsrc/minc_basic.h \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
74 libsrc/minc_config.h \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
75 libsrc/minc_error.h \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
76 libsrc/minc_private.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
77 libsrc/minc_routines.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
78 libsrc/minc_structures.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
79 libsrc/minc_useful.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
80 libsrc/minc_varlists.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
81 libsrc/type_limits.h \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
82 libsrc/hdf_convenience.h \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
83 progs/Proglib/convert_origin_to_start.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
84 progs/Proglib/minc_def.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
85 progs/minccalc/errx.h \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
86 progs/minccalc/node.h \
2548
3f3e9cc93eee * added a fix for histo calculation in otsu_threshold from Claude
Andrew L Janke <a.janke@gmail.com>
parents: 2518
diff changeset
87 progs/minccalc/gram.h \
2637
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
88 progs/mincmorph/kernel_io.h \
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
89 progs/mincmorph/kernel_ops.h \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
90 progs/mincresample/mincresample.h \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
91 progs/mincreshape/mincreshape.h \
2641
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
92 progs/mincsample/mt19937ar.h \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
93 libsrc2/minc2_private.h \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
94 progs/mincdump/mincdump.h \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
95 progs/mincdump/dumplib.h \
1868
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
96 progs/mincdump/vardata.h \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
97 progs/mincgen/generic.h \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
98 progs/mincgen/genlib.h \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
99 progs/mincgen/ncgen.h \
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
100 progs/mincgen/ncgentab.h \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
101 conversion/ecattominc/ecat_file.h \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
102 conversion/ecattominc/machine_indep.h \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
103 conversion/ecattominc/ecat_header_definition.h \
2055
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
104 conversion/minctoecat/ecat_write.h \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
105 conversion/minctoecat/machine_indep.h \
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
106 conversion/nifti1/nifti1.h \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
107 conversion/nifti1/nifti1_io.h \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
108 conversion/nifti1/nifti1_local.h \
2381
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
109 conversion/nifti1/znzlib.h \
2167
bef8ee0abe72 Add conversion/nifti1/analyze75.h to the build
bert <bert>
parents: 2158
diff changeset
110 conversion/nifti1/analyze75.h \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
111 conversion/dcm2mnc/acr_element_defs.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
112 conversion/dcm2mnc/dcm2mnc.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
113 conversion/dcm2mnc/dicom_read.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
114 conversion/dcm2mnc/dicom_to_minc.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
115 conversion/dcm2mnc/ext_element_defs.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
116 conversion/dcm2mnc/minc_file.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
117 conversion/dcm2mnc/progress.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
118 conversion/dcm2mnc/siemens_to_dicom.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
119 conversion/dcm2mnc/siemens_header_defs.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
120 conversion/dcm2mnc/siemens_header_table.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
121 conversion/dcm2mnc/spi_element_defs.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
122 conversion/dcm2mnc/string_to_filename.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
123 conversion/dcm2mnc/pms_element_defs.h \
2367
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
124 conversion/dcm2mnc/gems_element_defs.h \
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
125 conversion/vff2mnc/vff2mnc.h
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
126
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
127 if ACR_NEMA_TOOLS
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
128 include_HEADERS += conversion/Acr_nema/acr_nema.h
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
129
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
130 include_acr_nemadir = $(includedir)/acr_nema
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
131
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
132 include_acr_nema_HEADERS = \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
133 conversion/Acr_nema/acr_nema/acr_io.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
134 conversion/Acr_nema/acr_nema/dicom_client_routines.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
135 conversion/Acr_nema/acr_nema/dicom_network.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
136 conversion/Acr_nema/acr_nema/element.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
137 conversion/Acr_nema/acr_nema/file_io.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
138 conversion/Acr_nema/acr_nema/group.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
139 conversion/Acr_nema/acr_nema/message.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
140 conversion/Acr_nema/acr_nema/value_repr.h
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
141
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
142 else
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
143 #
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
144 # If not installing the full ACR/NEMA package, just add these headers to
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
145 # list of headers not to be installed.
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
146 #
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
147 noinst_HEADERS += \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
148 conversion/Acr_nema/acr_nema.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
149 conversion/Acr_nema/acr_nema/acr_io.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
150 conversion/Acr_nema/acr_nema/dicom_client_routines.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
151 conversion/Acr_nema/acr_nema/dicom_network.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
152 conversion/Acr_nema/acr_nema/element.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
153 conversion/Acr_nema/acr_nema/file_io.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
154 conversion/Acr_nema/acr_nema/group.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
155 conversion/Acr_nema/acr_nema/message.h \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
156 conversion/Acr_nema/acr_nema/value_repr.h
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
157
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
158 endif
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
159
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
160
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
161 # Libraries which must be built and installed.
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
162 #
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
163 lib_LTLIBRARIES = libminc2.la libvolume_io2.la
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
164
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
165 # Conditionally install the libacr_nema.la library. It must always be
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
166 # built even if it is not installed.
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
167 #
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
168 if ACR_NEMA_TOOLS
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
169 lib_LTLIBRARIES += libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
170 else
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
171 noinst_LTLIBRARIES = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
172 endif
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
173
2426
439a6b291a2c * initial commits from Steve to remove warnings
rotor <rotor>
parents: 2423
diff changeset
174 # Scripts we install: sh or perl.
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
175 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
176 dist_bin_SCRIPTS = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
177 progs/mincdiff/mincdiff \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
178 progs/mincedit/mincedit \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
179 progs/mincheader/mincheader \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
180 progs/mincview/mincview
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
181
2382
a852f1bc75cf * added xfmflip
rotor <rotor>
parents: 2381
diff changeset
182 # Scripts that we process (to add version #s) before install
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
183 bin_SCRIPTS = \
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
184 progs/minccomplete/minccomplete \
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
185 progs/minchistory/minchistory \
2629
9d489fbf4e7b * added mincpik to files that are autogenerated with version numbers
Andrew L Janke <a.janke@gmail.com>
parents: 2564
diff changeset
186 progs/mincpik/mincpik \
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
187 progs/xfm/xfmflip
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
188
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
189 # Programs we build and install.
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
190 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
191 bin_PROGRAMS = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
192 voxeltoworld \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
193 worldtovoxel \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
194 minc_modify_header \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
195 mincaverage \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
196 minccalc \
2499
b29b6ad22382 * ported HDF calls to 1.8.x
rotor <rotor>
parents: 2476
diff changeset
197 minccmp \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
198 mincconcat \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
199 minccopy \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
200 mincexpand \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
201 mincextract \
1868
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
202 mincgen \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
203 mincinfo \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
204 minclookup \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
205 mincmakescalar \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
206 mincmakevector \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
207 mincmath \
2637
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
208 mincmorph \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
209 mincresample \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
210 mincreshape \
2641
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
211 mincsample \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
212 mincstats \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
213 minctoraw \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
214 invert_raw_image \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
215 mincwindow \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
216 rawtominc \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
217 transformtags \
2513
42770fead03b * added xfm2def
rotor <rotor>
parents: 2506
diff changeset
218 xfm2def \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
219 xfmconcat \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
220 xfminvert \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
221 mincconvert \
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
222 mincdump \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
223 ecattominc \
2055
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
224 minctoecat \
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
225 mnc2nii \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
226 nii2mnc \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
227 upet2mnc \
2367
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
228 dcm2mnc \
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
229 vff2mnc
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
230
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
231 if ACR_NEMA_TOOLS
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
232 bin_PROGRAMS += \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
233 acr_test \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
234 dump_acr_nema \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
235 extract_acr_nema \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
236 read_acr_nema \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
237 dicom_test \
2274
5a3779559fad now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents: 2266
diff changeset
238 copy_acr_nema \
5a3779559fad now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents: 2266
diff changeset
239 byte_swap \
5a3779559fad now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents: 2266
diff changeset
240 extract
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
241 endif
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
242
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
243 noinst_PROGRAMS = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
244 mincexample1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
245 mincexample2
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
246
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
247 LDADD = libvolume_io2.la libminc2.la
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
248
2506
26b834cf2953 * removed GETTING_STARTED
rotor <rotor>
parents: 2502
diff changeset
249 EXTRA_DIST = \
1894
36beb39a0af4 Add minc_simple, Windows makefiles
bert <bert>
parents: 1868
diff changeset
250 $(m4_files) \
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
251 progs/minccomplete/minccomplete.in \
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
252 progs/minchistory/minchistory.in \
2629
9d489fbf4e7b * added mincpik to files that are autogenerated with version numbers
Andrew L Janke <a.janke@gmail.com>
parents: 2564
diff changeset
253 progs/mincpik/mincpik.in \
2382
a852f1bc75cf * added xfmflip
rotor <rotor>
parents: 2381
diff changeset
254 progs/xfm/xfmflip.in \
1511
635a866a18d8 *** empty log message ***
stever <stever>
parents: 1510
diff changeset
255 libsrc/strdup.c \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
256 epm-header.in \
1894
36beb39a0af4 Add minc_simple, Windows makefiles
bert <bert>
parents: 1868
diff changeset
257 libsrc/config.h.msvc-win32 \
36beb39a0af4 Add minc_simple, Windows makefiles
bert <bert>
parents: 1868
diff changeset
258 Makefile.msvc-win32 \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
259 conversion/Acr_nema/dicom.txt \
2421
ba548427bede * updated all my email addresses
rotor <rotor>
parents: 2407
diff changeset
260 INSTALL.minc \
2407
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
261 CMakeLists.txt \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
262 config.h.cmake \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
263 progs/CMakeLists.txt \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
264 conversion/CMakeLists.txt \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
265 cmake-modules/FindBISON.cmake \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
266 cmake-modules/FindFLEX.cmake \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
267 cmake-modules/FindHDF5.cmake \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
268 cmake-modules/FindMINC.cmake \
29afbfd41fc2 * few more fixes for CMake build
rotor <rotor>
parents: 2386
diff changeset
269 cmake-modules/FindNETCDF.cmake
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
270
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
271 m4_files = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
272 m4/mni_REQUIRE_LIB.m4 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
273 m4/smr_WITH_BUILD_PATH.m4
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
274
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
275
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
276 voxeltoworld_SOURCES = progs/coordinates/voxeltoworld.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
277
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
278 worldtovoxel_SOURCES = progs/coordinates/worldtovoxel.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
279
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
280 minc_modify_header_SOURCES = progs/minc_modify_header/minc_modify_header.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
281
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
282 mincaverage_SOURCES = progs/mincaverage/mincaverage.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
283
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
284 minccalc_CFLAGS = -Iprogs/minccalc -I$(srcdir)/progs/minccalc
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
285 minccalc_SOURCES = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
286 progs/minccalc/minccalc.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
287 progs/minccalc/gram.y \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
288 progs/minccalc/eval.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
289 progs/minccalc/ident.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
290 progs/minccalc/lex.l \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
291 progs/minccalc/node.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
292 progs/minccalc/optim.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
293 progs/minccalc/scalar.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
294 progs/minccalc/sym.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
295 progs/minccalc/vector.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
296
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
297 mincconcat_SOURCES = progs/mincconcat/mincconcat.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
298
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
299 minccopy_SOURCES = progs/minccopy/minccopy.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
300
2499
b29b6ad22382 * ported HDF calls to 1.8.x
rotor <rotor>
parents: 2476
diff changeset
301 minccmp_SOURCES = progs/minccmp/minccmp.c
b29b6ad22382 * ported HDF calls to 1.8.x
rotor <rotor>
parents: 2476
diff changeset
302
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
303 mincexample1_SOURCES = progs/mincexample/mincexample1.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
304
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
305 mincexample2_SOURCES = progs/mincexample/mincexample2.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
306
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
307 mincexpand_SOURCES = progs/mincexpand/mincexpand.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
308
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
309 mincextract_SOURCES = progs/mincextract/mincextract.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
310
1868
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
311 mincgen_SOURCES = \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
312 progs/mincgen/escapes.c \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
313 progs/mincgen/genlib.c \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
314 progs/mincgen/getfill.c \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
315 progs/mincgen/init.c \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
316 progs/mincgen/load.c \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
317 progs/mincgen/main.c \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
318 progs/mincgen/ncgentab.y \
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
319 progs/mincgen/ncgenyy.l
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
320
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
321
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
322 mincinfo_SOURCES = progs/mincinfo/mincinfo.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
323
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
324 minclookup_SOURCES = progs/minclookup/minclookup.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
325
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
326 mincmakescalar_SOURCES = progs/mincmakescalar/mincmakescalar.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
327
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
328 mincmakevector_SOURCES = progs/mincmakevector/mincmakevector.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
329
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
330 mincmath_SOURCES = progs/mincmath/mincmath.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
331
2637
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
332 mincmorph_CFLAGS = -Iprogs/mincmorph -I$(srcdir)/progs/mincmorph
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
333 mincmorph_SOURCES = \
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
334 progs/mincmorph/mincmorph.c \
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
335 progs/mincmorph/kernel_io.c \
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
336 progs/mincmorph/kernel_ops.c
0b9a5b816213 * added mincmorph
Andrew L Janke <a.janke@gmail.com>
parents: 2629
diff changeset
337
2641
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
338 mincsample_CFLAGS = -Iprogs/mincsample -I$(srcdir)/progs/mincsample
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
339 mincresample_SOURCES = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
340 progs/mincresample/mincresample.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
341 progs/mincresample/resample_volumes.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
342 progs/Proglib/convert_origin_to_start.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
343
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
344 mincreshape_SOURCES = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
345 progs/mincreshape/mincreshape.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
346 progs/mincreshape/copy_data.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
347
2641
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
348 mincsample_SOURCES = \
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
349 progs/mincsample/mincsample.c \
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
350 progs/mincsample/mt19937ar.c
aa328918dc06 Added mincsample and bumped version number
Andrew L Janke <a.janke@gmail.com>
parents: 2637
diff changeset
351
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
352 mincstats_SOURCES = progs/mincstats/mincstats.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
353
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
354 minctoraw_SOURCES = progs/minctoraw/minctoraw.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
355
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
356 invert_raw_image_SOURCES = progs/mincview/invert_raw_image.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
357
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
358 mincwindow_SOURCES = progs/mincwindow/mincwindow.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
359
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
360 rawtominc_SOURCES = \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
361 progs/rawtominc/rawtominc.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
362 progs/Proglib/convert_origin_to_start.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
363
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
364 transformtags_SOURCES = progs/xfm/transformtags.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
365
2513
42770fead03b * added xfm2def
rotor <rotor>
parents: 2506
diff changeset
366 xfm2def_SOURCES = progs/xfm/xfm2def.c
42770fead03b * added xfm2def
rotor <rotor>
parents: 2506
diff changeset
367
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
368 xfmconcat_SOURCES = progs/xfm/xfmconcat.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
369
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
370 xfminvert_SOURCES = progs/xfm/xfminvert.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
371
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
372 mincconvert_SOURCES = progs/mincconvert/mincconvert.c
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
373
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
374 mincdump_SOURCES = \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
375 progs/mincdump/mincdump.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
376 progs/mincdump/vardata.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
377 progs/mincdump/dumplib.c
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
378
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
379 ecattominc_SOURCES = \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
380 conversion/ecattominc/ecattominc.c \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
381 conversion/ecattominc/insertblood.c \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
382 conversion/ecattominc/ecat_file.c \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
383 conversion/ecattominc/machine_indep.c
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
384
2055
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
385 minctoecat_SOURCES = \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
386 conversion/minctoecat/minctoecat.c \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
387 conversion/minctoecat/ecat_write.c \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
388 conversion/minctoecat/machine_indep.c
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
389
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
390 nii2mnc_SOURCES = \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
391 conversion/nifti1/nii2mnc.c \
2381
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
392 conversion/nifti1/nifti1_io.c \
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
393 conversion/nifti1/znzlib.c
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
394
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
395 mnc2nii_SOURCES = \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
396 conversion/nifti1/mnc2nii.c \
2381
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
397 conversion/nifti1/nifti1_io.c \
f53c551835c6 * added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents: 2376
diff changeset
398 conversion/nifti1/znzlib.c
1947
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
399
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
400 upet2mnc_SOURCES = \
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
401 conversion/micropet/upet2mnc.c
45a5d8d96de8 Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents: 1925
diff changeset
402
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
403 dcm2mnc_LDADD = libacr_nema.la $(LDADD)
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
404
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
405 dcm2mnc_SOURCES = \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
406 conversion/dcm2mnc/dcm2mnc.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
407 conversion/dcm2mnc/dicom_to_minc.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
408 conversion/dcm2mnc/siemens_to_dicom.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
409 conversion/dcm2mnc/dicom_read.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
410 conversion/dcm2mnc/minc_file.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
411 conversion/dcm2mnc/progress.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
412 conversion/dcm2mnc/string_to_filename.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
413
2367
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
414 vff2mnc_SOURCES = \
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
415 conversion/vff2mnc/vff2mnc.c
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
416
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
417 acr_test_LDADD = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
418
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
419 acr_test_SOURCES = conversion/Acr_nema/acr_test.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
420
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
421 dump_acr_nema_LDADD = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
422
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
423 dump_acr_nema_SOURCES = conversion/Acr_nema/dump_acr_nema.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
424
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
425 extract_acr_nema_LDADD = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
426
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
427 extract_acr_nema_SOURCES = conversion/Acr_nema/extract_acr_nema.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
428
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
429 read_acr_nema_LDADD = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
430
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
431 read_acr_nema_SOURCES = conversion/Acr_nema/read_acr_nema.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
432
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
433 dicom_test_LDADD = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
434
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
435 dicom_test_SOURCES = conversion/Acr_nema/dicom_test.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
436
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
437 copy_acr_nema_LDADD = libacr_nema.la
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
438
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
439 copy_acr_nema_SOURCES = conversion/Acr_nema/copy_acr_nema.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
440
2274
5a3779559fad now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents: 2266
diff changeset
441 extract_SOURCES = conversion/image_filters/extract.c
5a3779559fad now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents: 2266
diff changeset
442 byte_swap_SOURCES = conversion/image_filters/byte_swap.c
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
443
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
444
2518
1e2ede5b782d * final updates for 2.1.00 release
rotor <rotor>
parents: 2513
diff changeset
445 libminc2_la_LDFLAGS = -version-info 2:3:1
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
446 libminc2_la_SOURCES = \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
447 libsrc/ParseArgv.c \
2545
4b26fb8b776c * added a patch from Steve Robbins removing references to PATH_MAX
Andrew L Janke <a.janke@gmail.com>
parents: 2518
diff changeset
448 libsrc/read_file_names.c \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
449 libsrc/dim_conversion.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
450 libsrc/image_conversion.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
451 libsrc/minc_convenience.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
452 libsrc/minc_error.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
453 libsrc/nd_loop.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
454 libsrc/netcdf_convenience.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
455 libsrc/time_stamp.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
456 libsrc/value_conversion.c \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
457 libsrc/voxel_loop.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
458 libsrc/hdf_convenience.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
459 libsrc/minc_compat.c \
2189
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
460 libsrc/minc_simple.c
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
461
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
462 if MINC2
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
463 libminc2_la_SOURCES += \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
464 libsrc2/convert.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
465 libsrc2/datatype.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
466 libsrc2/dimension.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
467 libsrc2/free.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
468 libsrc2/grpattr.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
469 libsrc2/hyper.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
470 libsrc2/label.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
471 libsrc2/m2util.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
472 libsrc2/record.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
473 libsrc2/slice.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
474 libsrc2/valid.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
475 libsrc2/volprops.c \
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
476 libsrc2/volume.c
2189
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
477 else
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
478 EXTRA_DIST += \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
479 libsrc2/convert.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
480 libsrc2/datatype.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
481 libsrc2/dimension.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
482 libsrc2/free.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
483 libsrc2/grpattr.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
484 libsrc2/hyper.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
485 libsrc2/label.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
486 libsrc2/m2util.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
487 libsrc2/record.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
488 libsrc2/slice.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
489 libsrc2/valid.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
490 libsrc2/volprops.c \
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
491 libsrc2/volume.c
b6517dede232 Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents: 2167
diff changeset
492 endif
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
493
2476
be77e1e3845c * CMakeLists.txt: updated version
rotor <rotor>
parents: 2470
diff changeset
494 libvolume_io2_la_LDFLAGS = -version-info 2:2:1
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
495 libvolume_io2_la_SOURCES = \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
496 volume_io/Geometry/colour.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
497 volume_io/Geometry/colour_def.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
498 volume_io/Geometry/gaussian.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
499 volume_io/Geometry/inverse.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
500 volume_io/Geometry/newton.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
501 volume_io/Geometry/points.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
502 volume_io/Geometry/splines.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
503 volume_io/Geometry/tensors.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
504 volume_io/Geometry/transforms.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
505 volume_io/MNI_formats/gen_xf_io.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
506 volume_io/MNI_formats/gen_xfs.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
507 volume_io/MNI_formats/grid_transforms.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
508 volume_io/MNI_formats/mni_io.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
509 volume_io/MNI_formats/tag_points.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
510 volume_io/MNI_formats/thin_plate_spline.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
511 volume_io/Prog_utils/alloc.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
512 volume_io/Prog_utils/alloc_check.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
513 volume_io/Prog_utils/arrays.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
514 volume_io/Prog_utils/files.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
515 volume_io/Prog_utils/print.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
516 volume_io/Prog_utils/progress.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
517 volume_io/Prog_utils/string.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
518 volume_io/Prog_utils/time.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
519 volume_io/Volumes/evaluate.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
520 volume_io/Volumes/get_hyperslab.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
521 volume_io/Volumes/input_free.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
522 volume_io/Volumes/input_mnc.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
523 volume_io/Volumes/input_volume.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
524 volume_io/Volumes/multidim_arrays.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
525 volume_io/Volumes/output_mnc.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
526 volume_io/Volumes/output_volume.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
527 volume_io/Volumes/set_hyperslab.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
528 volume_io/Volumes/volume_cache.c \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
529 volume_io/Volumes/volumes.c
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
530
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
531 libacr_nema_la_SOURCES = \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
532 conversion/Acr_nema/acr_io.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
533 conversion/Acr_nema/dicom_client_routines.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
534 conversion/Acr_nema/dicom_network.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
535 conversion/Acr_nema/element.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
536 conversion/Acr_nema/file_io.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
537 conversion/Acr_nema/globals.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
538 conversion/Acr_nema/group.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
539 conversion/Acr_nema/message.c \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
540 conversion/Acr_nema/value_repr.c
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
541
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
542 # MAN pages go here. The "dist_" prefix signals that they
1581
c072a46c687d *** empty log message ***
stever <stever>
parents: 1537
diff changeset
543 # are to be included in source distribution.
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
544 #
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
545 dist_man1_MANS = \
1505
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
546 progs/coordinates/voxeltoworld.man1 \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
547 progs/minc_modify_header/minc_modify_header.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
548 progs/mincaverage/mincaverage.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
549 progs/minccalc/minccalc.man1 \
2502
8bc0b7839310 * added -version flag to minchistory via POD
rotor <rotor>
parents: 2499
diff changeset
550 progs/minccomplete/minccomplete.man1 \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
551 progs/mincconcat/mincconcat.man1 \
2499
b29b6ad22382 * ported HDF calls to 1.8.x
rotor <rotor>
parents: 2476
diff changeset
552 progs/minccmp/minccmp.man1 \
1505
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
553 progs/minccopy/minccopy.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
554 progs/mincdiff/mincdiff.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
555 progs/mincedit/mincedit.man1 \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
556 progs/mincexpand/mincexpand.man1 \
1505
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
557 progs/mincextract/mincextract.man1 \
1868
a324c630ebc7 Added mincgen/mincdump
bert <bert>
parents: 1806
diff changeset
558 progs/mincgen/mincgen.man1 \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
559 progs/mincheader/mincheader.man1 \
2158
f857580298ee Add man page for minchistory.
stever <stever>
parents: 2138
diff changeset
560 progs/minchistory/minchistory.man1 \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
561 progs/mincinfo/mincinfo.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
562 progs/minclookup/minclookup.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
563 progs/mincmakescalar/mincmakescalar.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
564 progs/mincmakevector/mincmakevector.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
565 progs/mincmath/mincmath.man1 \
1581
c072a46c687d *** empty log message ***
stever <stever>
parents: 1537
diff changeset
566 progs/mincpik/mincpik.man1 \
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
567 progs/mincresample/mincresample.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
568 progs/mincreshape/mincreshape.man1 \
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
569 progs/mincstats/mincstats.man1 \
1505
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
570 progs/minctoraw/minctoraw.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
571 progs/mincview/invert_raw_image.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
572 progs/mincview/mincview.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
573 progs/mincwindow/mincwindow.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
574 progs/rawtominc/rawtominc.man1 \
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
575 progs/xfm/transformtags.man1 \
2513
42770fead03b * added xfm2def
rotor <rotor>
parents: 2506
diff changeset
576 progs/xfm/xfm2def.man1 \
1505
14fb7b406b04 Add manpages from Debian package.
stever <stever>
parents: 1504
diff changeset
577 progs/xfm/xfmconcat.man1 \
1763
70c1605badbc Added new stuff for MINC 2.0
bert <bert>
parents: 1582
diff changeset
578 progs/xfm/xfminvert.man1 \
2386
9820d5a86b02 * changes for Claude for free in volume_io, added xfmflip,
rotor <rotor>
parents: 2382
diff changeset
579 progs/xfm/xfmflip.man1 \
2055
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
580 progs/mincconvert/mincconvert.man1 \
f9fbad7a060f Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents: 1947
diff changeset
581 conversion/ecattominc/ecattominc.man1 \
2138
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
582 conversion/minctoecat/minctoecat.man1 \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
583 conversion/nifti1/nii2mnc.man1 \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
584 conversion/nifti1/mnc2nii.man1 \
dbfdf9f169d5 Latest build updates
bert <bert>
parents: 2055
diff changeset
585 conversion/micropet/upet2mnc.man1 \
2367
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
586 conversion/dcm2mnc/dcm2mnc.man1 \
8caaa54d84ec Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents: 2274
diff changeset
587 conversion/vff2mnc/vff2mnc.man1
1504
c460bf395a07 Update build system to use automake and libtool.
stever <stever>
parents:
diff changeset
588
1511
635a866a18d8 *** empty log message ***
stever <stever>
parents: 1510
diff changeset
589 dist_man3_MANS = libsrc/ParseArgv.man3