Mercurial > hg > minc-tools
annotate Makefile.am @ 2548:3f3e9cc93eee
* added a fix for histo calculation in otsu_threshold from Claude
author | Andrew L Janke <a.janke@gmail.com> |
---|---|
date | Wed, 07 Dec 2011 10:17:31 +1000 |
parents | 1e2ede5b782d |
children | f99952fb216f |
rev | line source |
---|---|
1763 | 1 # Makefile.am for MINC2 |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
2 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
3 AUTOMAKE_OPTIONS = check-news subdir-objects |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
4 ACLOCAL_AMFLAGS = -I m4 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
5 |
1806 | 6 AM_CFLAGS = |
2381
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
7 AM_YFLAGS = -d --debug |
1763 | 8 |
2189
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
9 SUBDIRS = . volume_io testdir doc |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
10 if MINC2 |
2470 | 11 SUBDIRS += libsrc2/test |
2189
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
12 endif |
1508 | 13 |
2502
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
14 # how to build man pages from POD |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
15 progs/minccomplete/minccomplete.man1: progs/minccomplete/minccomplete |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
16 $(POD2MAN) --section=1 $< > $@ |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
17 progs/minchistory/minchistory.man1: progs/minchistory/minchistory |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
18 $(POD2MAN) --section=1 $< > $@ |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
19 |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
20 # Add these to the include searches. |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
21 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
22 INCLUDES = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
23 -I$(top_srcdir)/libsrc \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
24 -I$(top_builddir)/volume_io/Include \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
25 -I$(top_srcdir)/volume_io/Include \ |
2138 | 26 -I$(top_srcdir)/progs/Proglib \ |
27 -I$(top_srcdir)/conversion/Acr_nema | |
2381
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
28 |
2373
037e089f685f
* small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents:
2367
diff
changeset
|
29 if MINC2 |
037e089f685f
* small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents:
2367
diff
changeset
|
30 INCLUDES += -I$(top_srcdir)/libsrc2 |
037e089f685f
* small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents:
2367
diff
changeset
|
31 endif |
037e089f685f
* small build fixes (added libsrc2 to the INCLUDES)
rotor <rotor>
parents:
2367
diff
changeset
|
32 |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
33 # Headers which must be installed. |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
34 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
35 include_HEADERS = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
36 libsrc/minc.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
37 libsrc/ParseArgv.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
38 libsrc/voxel_loop.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
39 libsrc/nd_loop.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
40 libsrc/time_stamp.h \ |
1763 | 41 libsrc/minc_compat.h \ |
42 volume_io/Include/volume_io.h \ | |
1894 | 43 libsrc2/minc2.h \ |
44 libsrc/minc_simple.h | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
45 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
46 include_volume_iodir = $(includedir)/volume_io |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
47 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
48 include_volume_io_HEADERS = \ |
2055
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
49 volume_io/Include/volume_io/alloc.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
50 volume_io/Include/volume_io/arrays.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
51 volume_io/Include/volume_io/basic.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
52 volume_io/Include/volume_io/def_math.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
53 volume_io/Include/volume_io/files.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
54 volume_io/Include/volume_io/geom_structs.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
55 volume_io/Include/volume_io/geometry.h \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
56 volume_io/Include/internal_volume_io.h \ |
2055
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
57 volume_io/Include/volume_io/multidim.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
58 volume_io/Include/volume_io/progress.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
59 volume_io/Include/volume_io/string_funcs.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
60 volume_io/Include/volume_io/system_dependent.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
61 volume_io/Include/volume_io/transforms.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
62 volume_io/Include/volume_io/vol_io_prototypes.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
63 volume_io/Include/volume_io/volume.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
64 volume_io/Include/volume_io/volume_cache.h |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
65 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
66 # Header files which must be included in the distribution but which are |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
67 # not part of the installation. |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
68 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
69 noinst_HEADERS = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
70 libsrc/minc_basic.h \ |
1763 | 71 libsrc/minc_config.h \ |
72 libsrc/minc_error.h \ | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
73 libsrc/minc_private.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
74 libsrc/minc_routines.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
75 libsrc/minc_structures.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
76 libsrc/minc_useful.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
77 libsrc/minc_varlists.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
78 libsrc/type_limits.h \ |
1763 | 79 libsrc/hdf_convenience.h \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
80 progs/Proglib/convert_origin_to_start.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
81 progs/Proglib/minc_def.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
82 progs/minccalc/errx.h \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
83 progs/minccalc/node.h \ |
2548
3f3e9cc93eee
* added a fix for histo calculation in otsu_threshold from Claude
Andrew L Janke <a.janke@gmail.com>
parents:
2518
diff
changeset
|
84 progs/minccalc/gram.h \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
85 progs/mincresample/mincresample.h \ |
1763 | 86 progs/mincreshape/mincreshape.h \ |
87 libsrc2/minc2_private.h \ | |
88 progs/mincdump/mincdump.h \ | |
89 progs/mincdump/dumplib.h \ | |
1868 | 90 progs/mincdump/vardata.h \ |
91 progs/mincgen/generic.h \ | |
92 progs/mincgen/genlib.h \ | |
93 progs/mincgen/ncgen.h \ | |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
94 progs/mincgen/ncgentab.h \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
95 conversion/ecattominc/ecat_file.h \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
96 conversion/ecattominc/machine_indep.h \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
97 conversion/ecattominc/ecat_header_definition.h \ |
2055
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
98 conversion/minctoecat/ecat_write.h \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
99 conversion/minctoecat/machine_indep.h \ |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
100 conversion/nifti1/nifti1.h \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
101 conversion/nifti1/nifti1_io.h \ |
2138 | 102 conversion/nifti1/nifti1_local.h \ |
2381
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
103 conversion/nifti1/znzlib.h \ |
2167
bef8ee0abe72
Add conversion/nifti1/analyze75.h to the build
bert <bert>
parents:
2158
diff
changeset
|
104 conversion/nifti1/analyze75.h \ |
2138 | 105 conversion/dcm2mnc/acr_element_defs.h \ |
106 conversion/dcm2mnc/dcm2mnc.h \ | |
107 conversion/dcm2mnc/dicom_read.h \ | |
108 conversion/dcm2mnc/dicom_to_minc.h \ | |
109 conversion/dcm2mnc/ext_element_defs.h \ | |
110 conversion/dcm2mnc/minc_file.h \ | |
111 conversion/dcm2mnc/progress.h \ | |
112 conversion/dcm2mnc/siemens_to_dicom.h \ | |
113 conversion/dcm2mnc/siemens_header_defs.h \ | |
114 conversion/dcm2mnc/siemens_header_table.h \ | |
115 conversion/dcm2mnc/spi_element_defs.h \ | |
116 conversion/dcm2mnc/string_to_filename.h \ | |
117 conversion/dcm2mnc/pms_element_defs.h \ | |
2367
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
118 conversion/dcm2mnc/gems_element_defs.h \ |
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
119 conversion/vff2mnc/vff2mnc.h |
2138 | 120 |
121 if ACR_NEMA_TOOLS | |
122 include_HEADERS += conversion/Acr_nema/acr_nema.h | |
123 | |
124 include_acr_nemadir = $(includedir)/acr_nema | |
125 | |
126 include_acr_nema_HEADERS = \ | |
127 conversion/Acr_nema/acr_nema/acr_io.h \ | |
128 conversion/Acr_nema/acr_nema/dicom_client_routines.h \ | |
129 conversion/Acr_nema/acr_nema/dicom_network.h \ | |
130 conversion/Acr_nema/acr_nema/element.h \ | |
131 conversion/Acr_nema/acr_nema/file_io.h \ | |
132 conversion/Acr_nema/acr_nema/group.h \ | |
133 conversion/Acr_nema/acr_nema/message.h \ | |
134 conversion/Acr_nema/acr_nema/value_repr.h | |
135 | |
136 else | |
137 # | |
138 # If not installing the full ACR/NEMA package, just add these headers to | |
139 # list of headers not to be installed. | |
140 # | |
141 noinst_HEADERS += \ | |
142 conversion/Acr_nema/acr_nema.h \ | |
143 conversion/Acr_nema/acr_nema/acr_io.h \ | |
144 conversion/Acr_nema/acr_nema/dicom_client_routines.h \ | |
145 conversion/Acr_nema/acr_nema/dicom_network.h \ | |
146 conversion/Acr_nema/acr_nema/element.h \ | |
147 conversion/Acr_nema/acr_nema/file_io.h \ | |
148 conversion/Acr_nema/acr_nema/group.h \ | |
149 conversion/Acr_nema/acr_nema/message.h \ | |
150 conversion/Acr_nema/acr_nema/value_repr.h | |
151 | |
152 endif | |
153 | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
154 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
155 # Libraries which must be built and installed. |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
156 # |
1763 | 157 lib_LTLIBRARIES = libminc2.la libvolume_io2.la |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
158 |
2138 | 159 # Conditionally install the libacr_nema.la library. It must always be |
160 # built even if it is not installed. | |
161 # | |
162 if ACR_NEMA_TOOLS | |
163 lib_LTLIBRARIES += libacr_nema.la | |
164 else | |
165 noinst_LTLIBRARIES = libacr_nema.la | |
166 endif | |
167 | |
2426
439a6b291a2c
* initial commits from Steve to remove warnings
rotor <rotor>
parents:
2423
diff
changeset
|
168 # Scripts we install: sh or perl. |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
169 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
170 dist_bin_SCRIPTS = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
171 progs/mincdiff/mincdiff \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
172 progs/mincedit/mincedit \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
173 progs/mincheader/mincheader \ |
1581 | 174 progs/mincpik/mincpik \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
175 progs/mincview/mincview |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
176 |
2382 | 177 # Scripts that we process (to add version #s) before install |
2502
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
178 bin_SCRIPTS = \ |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
179 progs/minccomplete/minccomplete \ |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
180 progs/minchistory/minchistory \ |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
181 progs/xfm/xfmflip |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
182 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
183 # Programs we build and install. |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
184 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
185 bin_PROGRAMS = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
186 voxeltoworld \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
187 worldtovoxel \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
188 minc_modify_header \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
189 mincaverage \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
190 minccalc \ |
2499 | 191 minccmp \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
192 mincconcat \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
193 minccopy \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
194 mincexpand \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
195 mincextract \ |
1868 | 196 mincgen \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
197 mincinfo \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
198 minclookup \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
199 mincmakescalar \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
200 mincmakevector \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
201 mincmath \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
202 mincresample \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
203 mincreshape \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
204 mincstats \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
205 minctoraw \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
206 invert_raw_image \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
207 mincwindow \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
208 rawtominc \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
209 transformtags \ |
2513 | 210 xfm2def \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
211 xfmconcat \ |
1763 | 212 xfminvert \ |
213 mincconvert \ | |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
214 mincdump \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
215 ecattominc \ |
2055
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
216 minctoecat \ |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
217 mnc2nii \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
218 nii2mnc \ |
2138 | 219 upet2mnc \ |
2367
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
220 dcm2mnc \ |
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
221 vff2mnc |
2138 | 222 |
223 if ACR_NEMA_TOOLS | |
224 bin_PROGRAMS += \ | |
225 acr_test \ | |
226 dump_acr_nema \ | |
227 extract_acr_nema \ | |
228 read_acr_nema \ | |
229 dicom_test \ | |
2274
5a3779559fad
now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents:
2266
diff
changeset
|
230 copy_acr_nema \ |
5a3779559fad
now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents:
2266
diff
changeset
|
231 byte_swap \ |
5a3779559fad
now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents:
2266
diff
changeset
|
232 extract |
2138 | 233 endif |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
234 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
235 noinst_PROGRAMS = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
236 mincexample1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
237 mincexample2 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
238 |
1763 | 239 LDADD = libvolume_io2.la libminc2.la |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
240 |
2506 | 241 EXTRA_DIST = \ |
1894 | 242 $(m4_files) \ |
2502
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
243 progs/minccomplete/minccomplete.in \ |
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
244 progs/minchistory/minchistory.in \ |
2382 | 245 progs/xfm/xfmflip.in \ |
1511 | 246 libsrc/strdup.c \ |
2138 | 247 epm-header.in \ |
1894 | 248 libsrc/config.h.msvc-win32 \ |
249 Makefile.msvc-win32 \ | |
2138 | 250 conversion/Acr_nema/dicom.txt \ |
2421 | 251 INSTALL.minc \ |
2407 | 252 CMakeLists.txt \ |
253 config.h.cmake \ | |
254 progs/CMakeLists.txt \ | |
255 conversion/CMakeLists.txt \ | |
256 cmake-modules/FindBISON.cmake \ | |
257 cmake-modules/FindFLEX.cmake \ | |
258 cmake-modules/FindHDF5.cmake \ | |
259 cmake-modules/FindMINC.cmake \ | |
260 cmake-modules/FindNETCDF.cmake | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
261 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
262 m4_files = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
263 m4/mni_REQUIRE_LIB.m4 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
264 m4/smr_WITH_BUILD_PATH.m4 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
265 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
266 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
267 voxeltoworld_SOURCES = progs/coordinates/voxeltoworld.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
268 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
269 worldtovoxel_SOURCES = progs/coordinates/worldtovoxel.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
270 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
271 minc_modify_header_SOURCES = progs/minc_modify_header/minc_modify_header.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
272 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
273 mincaverage_SOURCES = progs/mincaverage/mincaverage.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
274 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
275 minccalc_CFLAGS = -Iprogs/minccalc -I$(srcdir)/progs/minccalc |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
276 minccalc_SOURCES = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
277 progs/minccalc/minccalc.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
278 progs/minccalc/gram.y \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
279 progs/minccalc/eval.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
280 progs/minccalc/ident.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
281 progs/minccalc/lex.l \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
282 progs/minccalc/node.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
283 progs/minccalc/optim.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
284 progs/minccalc/scalar.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
285 progs/minccalc/sym.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
286 progs/minccalc/vector.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
287 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
288 mincconcat_SOURCES = progs/mincconcat/mincconcat.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
289 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
290 minccopy_SOURCES = progs/minccopy/minccopy.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
291 |
2499 | 292 minccmp_SOURCES = progs/minccmp/minccmp.c |
293 | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
294 mincexample1_SOURCES = progs/mincexample/mincexample1.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
295 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
296 mincexample2_SOURCES = progs/mincexample/mincexample2.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
297 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
298 mincexpand_SOURCES = progs/mincexpand/mincexpand.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
299 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
300 mincextract_SOURCES = progs/mincextract/mincextract.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
301 |
1868 | 302 mincgen_SOURCES = \ |
303 progs/mincgen/escapes.c \ | |
304 progs/mincgen/genlib.c \ | |
305 progs/mincgen/getfill.c \ | |
306 progs/mincgen/init.c \ | |
307 progs/mincgen/load.c \ | |
308 progs/mincgen/main.c \ | |
309 progs/mincgen/ncgentab.y \ | |
310 progs/mincgen/ncgenyy.l | |
311 | |
312 | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
313 mincinfo_SOURCES = progs/mincinfo/mincinfo.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
314 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
315 minclookup_SOURCES = progs/minclookup/minclookup.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
316 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
317 mincmakescalar_SOURCES = progs/mincmakescalar/mincmakescalar.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
318 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
319 mincmakevector_SOURCES = progs/mincmakevector/mincmakevector.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
320 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
321 mincmath_SOURCES = progs/mincmath/mincmath.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
322 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
323 mincresample_SOURCES = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
324 progs/mincresample/mincresample.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
325 progs/mincresample/resample_volumes.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
326 progs/Proglib/convert_origin_to_start.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
327 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
328 mincreshape_SOURCES = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
329 progs/mincreshape/mincreshape.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
330 progs/mincreshape/copy_data.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
331 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
332 mincstats_SOURCES = progs/mincstats/mincstats.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
333 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
334 minctoraw_SOURCES = progs/minctoraw/minctoraw.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
335 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
336 invert_raw_image_SOURCES = progs/mincview/invert_raw_image.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
337 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
338 mincwindow_SOURCES = progs/mincwindow/mincwindow.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
339 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
340 rawtominc_SOURCES = \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
341 progs/rawtominc/rawtominc.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
342 progs/Proglib/convert_origin_to_start.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
343 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
344 transformtags_SOURCES = progs/xfm/transformtags.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
345 |
2513 | 346 xfm2def_SOURCES = progs/xfm/xfm2def.c |
347 | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
348 xfmconcat_SOURCES = progs/xfm/xfmconcat.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
349 |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
350 xfminvert_SOURCES = progs/xfm/xfminvert.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
351 |
1763 | 352 mincconvert_SOURCES = progs/mincconvert/mincconvert.c |
353 | |
354 mincdump_SOURCES = \ | |
355 progs/mincdump/mincdump.c \ | |
356 progs/mincdump/vardata.c \ | |
357 progs/mincdump/dumplib.c | |
358 | |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
359 ecattominc_SOURCES = \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
360 conversion/ecattominc/ecattominc.c \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
361 conversion/ecattominc/insertblood.c \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
362 conversion/ecattominc/ecat_file.c \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
363 conversion/ecattominc/machine_indep.c |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
364 |
2055
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
365 minctoecat_SOURCES = \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
366 conversion/minctoecat/minctoecat.c \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
367 conversion/minctoecat/ecat_write.c \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
368 conversion/minctoecat/machine_indep.c |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
369 |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
370 nii2mnc_SOURCES = \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
371 conversion/nifti1/nii2mnc.c \ |
2381
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
372 conversion/nifti1/nifti1_io.c \ |
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
373 conversion/nifti1/znzlib.c |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
374 |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
375 mnc2nii_SOURCES = \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
376 conversion/nifti1/mnc2nii.c \ |
2381
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
377 conversion/nifti1/nifti1_io.c \ |
f53c551835c6
* added --debug to AM_YFLAGS for minccalc build (thanks Claude)
rotor <rotor>
parents:
2376
diff
changeset
|
378 conversion/nifti1/znzlib.c |
1947
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
379 |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
380 upet2mnc_SOURCES = \ |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
381 conversion/micropet/upet2mnc.c |
45a5d8d96de8
Add microPET, ECAT, and NIfTI-1 converters to the build
bert <bert>
parents:
1925
diff
changeset
|
382 |
2138 | 383 dcm2mnc_LDADD = libacr_nema.la $(LDADD) |
384 | |
385 dcm2mnc_SOURCES = \ | |
386 conversion/dcm2mnc/dcm2mnc.c \ | |
387 conversion/dcm2mnc/dicom_to_minc.c \ | |
388 conversion/dcm2mnc/siemens_to_dicom.c \ | |
389 conversion/dcm2mnc/dicom_read.c \ | |
390 conversion/dcm2mnc/minc_file.c \ | |
391 conversion/dcm2mnc/progress.c \ | |
392 conversion/dcm2mnc/string_to_filename.c | |
393 | |
2367
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
394 vff2mnc_SOURCES = \ |
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
395 conversion/vff2mnc/vff2mnc.c |
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
396 |
2138 | 397 acr_test_LDADD = libacr_nema.la |
398 | |
399 acr_test_SOURCES = conversion/Acr_nema/acr_test.c | |
400 | |
401 dump_acr_nema_LDADD = libacr_nema.la | |
402 | |
403 dump_acr_nema_SOURCES = conversion/Acr_nema/dump_acr_nema.c | |
404 | |
405 extract_acr_nema_LDADD = libacr_nema.la | |
406 | |
407 extract_acr_nema_SOURCES = conversion/Acr_nema/extract_acr_nema.c | |
408 | |
409 read_acr_nema_LDADD = libacr_nema.la | |
410 | |
411 read_acr_nema_SOURCES = conversion/Acr_nema/read_acr_nema.c | |
412 | |
413 dicom_test_LDADD = libacr_nema.la | |
414 | |
415 dicom_test_SOURCES = conversion/Acr_nema/dicom_test.c | |
416 | |
417 copy_acr_nema_LDADD = libacr_nema.la | |
418 | |
419 copy_acr_nema_SOURCES = conversion/Acr_nema/copy_acr_nema.c | |
420 | |
2274
5a3779559fad
now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents:
2266
diff
changeset
|
421 extract_SOURCES = conversion/image_filters/extract.c |
5a3779559fad
now building extract and byte_swap if building acr nema tools
jharlap <jharlap>
parents:
2266
diff
changeset
|
422 byte_swap_SOURCES = conversion/image_filters/byte_swap.c |
2138 | 423 |
424 | |
2518 | 425 libminc2_la_LDFLAGS = -version-info 2:3:1 |
1763 | 426 libminc2_la_SOURCES = \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
427 libsrc/ParseArgv.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
428 libsrc/dim_conversion.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
429 libsrc/image_conversion.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
430 libsrc/minc_convenience.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
431 libsrc/minc_error.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
432 libsrc/nd_loop.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
433 libsrc/netcdf_convenience.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
434 libsrc/time_stamp.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
435 libsrc/value_conversion.c \ |
1763 | 436 libsrc/voxel_loop.c \ |
437 libsrc/hdf_convenience.c \ | |
438 libsrc/minc_compat.c \ | |
2189
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
439 libsrc/minc_simple.c |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
440 |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
441 if MINC2 |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
442 libminc2_la_SOURCES += \ |
1763 | 443 libsrc2/convert.c \ |
444 libsrc2/datatype.c \ | |
445 libsrc2/dimension.c \ | |
446 libsrc2/free.c \ | |
447 libsrc2/grpattr.c \ | |
448 libsrc2/hyper.c \ | |
449 libsrc2/label.c \ | |
450 libsrc2/m2util.c \ | |
451 libsrc2/record.c \ | |
452 libsrc2/slice.c \ | |
453 libsrc2/valid.c \ | |
454 libsrc2/volprops.c \ | |
455 libsrc2/volume.c | |
2189
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
456 else |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
457 EXTRA_DIST += \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
458 libsrc2/convert.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
459 libsrc2/datatype.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
460 libsrc2/dimension.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
461 libsrc2/free.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
462 libsrc2/grpattr.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
463 libsrc2/hyper.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
464 libsrc2/label.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
465 libsrc2/m2util.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
466 libsrc2/record.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
467 libsrc2/slice.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
468 libsrc2/valid.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
469 libsrc2/volprops.c \ |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
470 libsrc2/volume.c |
b6517dede232
Modify build system to allow selection of MINC 2 (HDF5/NetCDF) or MINC 1 (NetCDF only)
bert <bert>
parents:
2167
diff
changeset
|
471 endif |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
472 |
2476 | 473 libvolume_io2_la_LDFLAGS = -version-info 2:2:1 |
1763 | 474 libvolume_io2_la_SOURCES = \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
475 volume_io/Geometry/colour.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
476 volume_io/Geometry/colour_def.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
477 volume_io/Geometry/gaussian.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
478 volume_io/Geometry/inverse.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
479 volume_io/Geometry/newton.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
480 volume_io/Geometry/points.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
481 volume_io/Geometry/splines.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
482 volume_io/Geometry/tensors.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
483 volume_io/Geometry/transforms.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
484 volume_io/MNI_formats/gen_xf_io.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
485 volume_io/MNI_formats/gen_xfs.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
486 volume_io/MNI_formats/grid_transforms.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
487 volume_io/MNI_formats/mni_io.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
488 volume_io/MNI_formats/tag_points.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
489 volume_io/MNI_formats/thin_plate_spline.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
490 volume_io/Prog_utils/alloc.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
491 volume_io/Prog_utils/alloc_check.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
492 volume_io/Prog_utils/arrays.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
493 volume_io/Prog_utils/files.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
494 volume_io/Prog_utils/print.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
495 volume_io/Prog_utils/progress.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
496 volume_io/Prog_utils/string.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
497 volume_io/Prog_utils/time.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
498 volume_io/Volumes/evaluate.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
499 volume_io/Volumes/get_hyperslab.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
500 volume_io/Volumes/input_free.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
501 volume_io/Volumes/input_mnc.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
502 volume_io/Volumes/input_volume.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
503 volume_io/Volumes/multidim_arrays.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
504 volume_io/Volumes/output_mnc.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
505 volume_io/Volumes/output_volume.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
506 volume_io/Volumes/set_hyperslab.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
507 volume_io/Volumes/volume_cache.c \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
508 volume_io/Volumes/volumes.c |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
509 |
2138 | 510 libacr_nema_la_SOURCES = \ |
511 conversion/Acr_nema/acr_io.c \ | |
512 conversion/Acr_nema/dicom_client_routines.c \ | |
513 conversion/Acr_nema/dicom_network.c \ | |
514 conversion/Acr_nema/element.c \ | |
515 conversion/Acr_nema/file_io.c \ | |
516 conversion/Acr_nema/globals.c \ | |
517 conversion/Acr_nema/group.c \ | |
518 conversion/Acr_nema/message.c \ | |
519 conversion/Acr_nema/value_repr.c | |
520 | |
2502
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
521 # MAN pages go here. The "dist_" prefix signals that they |
1581 | 522 # are to be included in source distribution. |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
523 # |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
524 dist_man1_MANS = \ |
1505 | 525 progs/coordinates/voxeltoworld.man1 \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
526 progs/minc_modify_header/minc_modify_header.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
527 progs/mincaverage/mincaverage.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
528 progs/minccalc/minccalc.man1 \ |
2502
8bc0b7839310
* added -version flag to minchistory via POD
rotor <rotor>
parents:
2499
diff
changeset
|
529 progs/minccomplete/minccomplete.man1 \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
530 progs/mincconcat/mincconcat.man1 \ |
2499 | 531 progs/minccmp/minccmp.man1 \ |
1505 | 532 progs/minccopy/minccopy.man1 \ |
533 progs/mincdiff/mincdiff.man1 \ | |
534 progs/mincedit/mincedit.man1 \ | |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
535 progs/mincexpand/mincexpand.man1 \ |
1505 | 536 progs/mincextract/mincextract.man1 \ |
1868 | 537 progs/mincgen/mincgen.man1 \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
538 progs/mincheader/mincheader.man1 \ |
2158 | 539 progs/minchistory/minchistory.man1 \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
540 progs/mincinfo/mincinfo.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
541 progs/minclookup/minclookup.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
542 progs/mincmakescalar/mincmakescalar.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
543 progs/mincmakevector/mincmakevector.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
544 progs/mincmath/mincmath.man1 \ |
1581 | 545 progs/mincpik/mincpik.man1 \ |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
546 progs/mincresample/mincresample.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
547 progs/mincreshape/mincreshape.man1 \ |
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
548 progs/mincstats/mincstats.man1 \ |
1505 | 549 progs/minctoraw/minctoraw.man1 \ |
550 progs/mincview/invert_raw_image.man1 \ | |
551 progs/mincview/mincview.man1 \ | |
552 progs/mincwindow/mincwindow.man1 \ | |
553 progs/rawtominc/rawtominc.man1 \ | |
554 progs/xfm/transformtags.man1 \ | |
2513 | 555 progs/xfm/xfm2def.man1 \ |
1505 | 556 progs/xfm/xfmconcat.man1 \ |
1763 | 557 progs/xfm/xfminvert.man1 \ |
2386
9820d5a86b02
* changes for Claude for free in volume_io, added xfmflip,
rotor <rotor>
parents:
2382
diff
changeset
|
558 progs/xfm/xfmflip.man1 \ |
2055
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
559 progs/mincconvert/mincconvert.man1 \ |
f9fbad7a060f
Update Makefile.am to reflect new man pages, headers, and volume_io header organization
bert <bert>
parents:
1947
diff
changeset
|
560 conversion/ecattominc/ecattominc.man1 \ |
2138 | 561 conversion/minctoecat/minctoecat.man1 \ |
562 conversion/nifti1/nii2mnc.man1 \ | |
563 conversion/nifti1/mnc2nii.man1 \ | |
564 conversion/micropet/upet2mnc.man1 \ | |
2367
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
565 conversion/dcm2mnc/dcm2mnc.man1 \ |
8caaa54d84ec
Modified Makefile to build vff2mnc conversion utility
baghdadi <baghdadi>
parents:
2274
diff
changeset
|
566 conversion/vff2mnc/vff2mnc.man1 |
1504
c460bf395a07
Update build system to use automake and libtool.
stever <stever>
parents:
diff
changeset
|
567 |
1511 | 568 dist_man3_MANS = libsrc/ParseArgv.man3 |