maint: Use Octave coding conventions for cuddling parentheses in scripts directory * lin2mu.m, loadaudio.m, wavread.m, accumarray.m, bicubic.m, celldisp.m, colon.m, cplxpair.m, dblquad.m, divergence.m, genvarname.m, gradient.m, int2str.m, interp1.m, interp1q.m, interp2.m, interpn.m, loadobj.m, nthargout.m, __isequal__.m, __splinen__.m, quadgk.m, quadl.m, quadv.m, rat.m, rot90.m, rotdim.m, saveobj.m, subsindex.m, triplequad.m, delaunay3.m, griddata.m, inpolygon.m, tsearchn.m, voronoi.m, get_first_help_sentence.m, which.m, gray2ind.m, pink.m, dlmwrite.m, strread.m, textread.m, textscan.m, housh.m, ishermitian.m, issymmetric.m, krylov.m, logm.m, null.m, rref.m, compare_versions.m, copyfile.m, dump_prefs.m, edit.m, fileparts.m, getappdata.m, isappdata.m, movefile.m, orderfields.m, parseparams.m, __xzip__.m, rmappdata.m, setappdata.m, swapbytes.m, unpack.m, ver.m, fminbnd.m, fminunc.m, fsolve.m, glpk.m, lsqnonneg.m, qp.m, sqp.m, configure_make.m, copy_files.m, describe.m, get_description.m, get_forge_pkg.m, install.m, installed_packages.m, is_architecture_dependent.m, load_package_dirs.m, print_package_description.m, rebuild.m, repackage.m, save_order.m, shell.m, allchild.m, ancestor.m, area.m, axes.m, axis.m, clabel.m, close.m, colorbar.m, comet.m, comet3.m, contour.m, cylinder.m, ezmesh.m, ezsurf.m, findobj.m, fplot.m, hist.m, isocolors.m, isonormals.m, isosurface.m, isprop.m, legend.m, mesh.m, meshz.m, pareto.m, pcolor.m, peaks.m, plot3.m, plotmatrix.m, plotyy.m, polar.m, print.m, __add_datasource__.m, __add_default_menu__.m, __axes_limits__.m, __bar__.m, __clabel__.m, __contour__.m, __errcomm__.m, __errplot__.m, __ezplot__.m, __file_filter__.m, __fltk_print__.m, __ghostscript__.m, __gnuplot_print__.m, __go_draw_axes__.m, __go_draw_figure__.m, __interp_cube__.m, __marching_cube__.m, __patch__.m, __pie__.m, __plt__.m, __print_parse_opts__.m, __quiver__.m, __scatter__.m, __stem__.m, __tight_eps_bbox__.m, __uigetdir_fltk__.m, __uigetfile_fltk__.m, __uiputfile_fltk__.m, quiver.m, quiver3.m, rectangle.m, refreshdata.m, ribbon.m, scatter.m, semilogy.m, shading.m, slice.m, subplot.m, surface.m, surfl.m, surfnorm.m, text.m, uigetfile.m, uiputfile.m, whitebg.m, deconv.m, mkpp.m, pchip.m, polyaffine.m, polyder.m, polygcd.m, polyout.m, polyval.m, ppint.m, ppjumps.m, ppval.m, residue.m, roots.m, spline.m, splinefit.m, addpref.m, getpref.m, setpref.m, ismember.m, setxor.m, arch_fit.m, arch_rnd.m, arch_test.m, autoreg_matrix.m, diffpara.m, fftconv.m, filter2.m, hanning.m, hurst.m, periodogram.m, triangle_sw.m, sinc.m, spectral_xdf.m, spencer.m, stft.m, synthesis.m, unwrap.m, yulewalker.m, bicgstab.m, gmres.m, pcg.m, pcr.m, __sprand_impl__.m, speye.m, spfun.m, sprandn.m, spstats.m, svds.m, treelayout.m, treeplot.m, bessel.m, factor.m, legendre.m, perms.m, primes.m, magic.m, toeplitz.m, corr.m, cov.m, mean.m, median.m, mode.m, qqplot.m, quantile.m, ranks.m, zscore.m, logistic_regression_likelihood.m, bartlett_test.m, chisquare_test_homogeneity.m, chisquare_test_independence.m, kolmogorov_smirnov_test.m, run_test.m, u_test.m, wilcoxon_test.m, z_test.m, z_test_2.m, bin2dec.m, dec2base.m, mat2str.m, strcat.m, strchr.m, strjust.m, strtok.m, substr.m, untabify.m, assert.m, demo.m, example.m, fail.m, speed.m, test.m, now.m: Use Octave coding conventions for cuddling parentheses in scripts directory.

## Copyright (C) 1995-2012 Kurt Hornik
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn  {Function File} {[@var{z}, @var{mu}, @var{sigma}] =} zscore (@var{x})
## @deftypefnx {Function File} {[@var{z}, @var{mu}, @var{sigma}] =} zscore (@var{x}, @var{opt})
## @deftypefnx {Function File} {[@var{z}, @var{mu}, @var{sigma}] =} zscore (@var{x}, @var{opt}, @var{dim})
## If @var{x} is a vector, subtract its mean and divide by its standard
## deviation.  If the standard deviation is zero, divide by 1 instead.
## The optional parameter @var{opt} determines the normalization to use
## when computing the standard deviation and is the same as the
## corresponding parameter for @code{std}.
##
## If @var{x} is a matrix, do the above along the first non-singleton
## dimension.  If the third optional argument @var{dim} is given, operate
## along this dimension.
##
## The mean and standard deviation along @var{dim} are given in @var{mu}
## and @var{sigma} respectively.
##
## @seealso{mean, std, center}
## @end deftypefn

## Author: KH <Kurt.Hornik@wu-wien.ac.at>
## Description: Subtract mean and divide by standard deviation

function [z, mu, sigma] = zscore (x, opt, dim)

  if (nargin < 1 || nargin > 3 )
    print_usage ();
  endif

  if (! (isnumeric (x) || islogical (x)))
    error ("zscore: X must be a numeric vector or matrix");
  endif

  if (nargin < 2)
    opt = 0;
  else
    if (opt != 0 && opt != 1 || ! isscalar (opt))
      error ("zscore: OPT must be empty, 0, or 1");
    endif
  endif

  nd = ndims (x);
  sz = size (x);
  if (nargin < 3)
    ## Find the first non-singleton dimension.
    (dim = find (sz > 1, 1)) || (dim = 1);
  else
    if (!(isscalar (dim) && dim == fix (dim))
        || !(1 <= dim && dim <= nd))
      error ("zscore: DIM must be an integer and a valid dimension");
    endif
  endif

  n = sz(dim);
  if (n == 0)
    z = x;
  else

    if (isinteger (x))
      x = double (x);
    endif

    mu = mean (x, dim);
    sigma = std (x, opt, dim);
    s = sigma;
    s(s==0) = 1;
    ## FIXME: Use normal broadcasting once we can disable that warning
    z = bsxfun (@rdivide, bsxfun (@minus, x, mu), s);
  endif

endfunction


%!assert (zscore ([1,2,3]), [-1,0,1])
%!assert (zscore (single ([1,2,3])), single ([-1,0,1]))
%!assert (zscore (int8 ([1,2,3])), [-1,0,1])
%!assert (zscore (ones (3,2,2,2)), zeros (3,2,2,2))
%!assert (zscore ([2,0,-2;0,2,0;-2,-2,2]), [1,0,-1;0,1,0;-1,-1,1])

%% Test input validation
%!error zscore ()
%!error zscore (1, 2, 3)
%!error zscore (['A'; 'B'])
%!error zscore (1, ones (2,2))
%!error zscore (1, 1.5)
%!error zscore (1, 1, 0)
%!error zscore (1, 3)